cpRAS: a novel circularly permuted RAS-like GTPase domain with a highly scattered phylogenetic distribution.

Elias M, Novotny M.

Biol Direct. 2008 May 29;3:21.

PMID: 18510733 [PubMed - in process]

Related Articles Free article in PMC

Structural stabilization of GTP-binding domains in circularly permuted GTPases: implications for RNA binding.

Anand B, Verma SK, Prakash B.

Nucleic Acids Res. 2006 Apr 28;34(8):2196-205. Print 2006.

PMID: 16648363 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

YjeQ, an essential, conserved, uncharacterized protein from Escherichia coli, is an unusual GTPase with circularly permuted G-motifs and marked burst kinetics.

Daigle DM, Rossi L, Berghuis AM, Aravind L, Koonin EV, Brown ED.

Biochemistry. 2002 Sep 17;41(37):11109-17.

PMID: 12220175 [PubMed - indexed for MEDLINE]

Related Articles

A novel lysine-rich domain and GTP binding motifs regulate the nucleolar retention of human guanine nucleotide binding protein, GNL3L.

Rao MR, Kumari G, Balasundaram D, Sankaranarayanan R, Mahalingam S.

J Mol Biol. 2006 Dec 8;364(4):637-54. Epub 2006 Sep 8.

PMID: 17034816 [PubMed - indexed for MEDLINE]

Related Articles

The crystal structure of YloQ, a circularly permuted GTPase essential for Bacillus subtilis viability.

Levdikov VM, Blagova EV, Brannigan JA, Cladière L, Antson AA, Isupov MN, Séror SJ, Wilkinson AJ.

J Mol Biol. 2004 Jul 16;340(4):767-82.

PMID: 15223319 [PubMed - indexed for MEDLINE]

Related Articles

Classification and evolution of P-loop GTPases and related ATPases.

Leipe DD, Wolf YI, Koonin EV, Aravind L.

J Mol Biol. 2002 Mar 15;317(1):41-72.

PMID: 11916378 [PubMed - indexed for MEDLINE]

Related Articles

Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif.

Bürglin TR.

BMC Genomics. 2008 Mar 11;9:127.

PMID: 18334026 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Human Lsg1 defines a family of essential GTPases that correlates with the evolution of compartmentalization.

Reynaud EG, Andrade MA, Bonneau F, Ly TB, Knop M, Scheffzek K, Pepperkok R.

BMC Biol. 2005 Oct 7;3:21.

PMID: 16209721 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

A novel family of P-loop NTPases with an unusual phyletic distribution and transmembrane segments inserted within the NTPase domain.

Aravind L, Iyer LM, Leipe DD, Koonin EV.

Genome Biol. 2004;5(5):R30. Epub 2004 Apr 16.

PMID: 15128444 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Cloning of a novel family of mammalian GTP-binding proteins (RagA, RagBs, RagB1) with remote similarity to the Ras-related GTPases.

Schürmann A, Brauers A, Massmann S, Becker W, Joost HG.

J Biol Chem. 1995 Dec 1;270(48):28982-8.

PMID: 7499430 [PubMed - indexed for MEDLINE]

Related Articles

The complete primary structure of type XII collagen shows a chimeric molecule with reiterated fibronectin type III motifs, von Willebrand factor A motifs, a domain homologous to a noncollagenous region of type IX collagen, and short collagenous domains with an Arg-Gly-Asp site.

Yamagata M, Yamada KM, Yamada SS, Shinomura T, Tanaka H, Nishida Y, Obara M, Kimata K.

J Cell Biol. 1991 Oct;115(1):209-21.

PMID: 1918137 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Crystal structure of YjeQ from Thermotoga maritima contains a circularly permuted GTPase domain.

Shin DH, Lou Y, Jancarik J, Yokota H, Kim R, Kim SH.

Proc Natl Acad Sci U S A. 2004 Sep 7;101(36):13198-203. Epub 2004 Aug 26.

PMID: 15331784 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Roots of angiosperm formins: the evolutionary history of plant FH2 domain-containing proteins.

Grunt M, Zárský V, Cvrcková F.

BMC Evol Biol. 2008 Apr 22;8:115.

PMID: 18430232 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Circularly permuted proteins in the protein structure database.

Jung J, Lee B.

Protein Sci. 2001 Sep;10(9):1881-6.

PMID: 11514678 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Evolutionary connection between the catalytic subunits of DNA-dependent RNA polymerases and eukaryotic RNA-dependent RNA polymerases and the origin of RNA polymerases.

Iyer LM, Koonin EV, Aravind L.

BMC Struct Biol. 2003 Jan 28;3:1. Epub 2003 Jan 28.

PMID: 12553882 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

[ELISA of paragonimiasis in cat by crude and purified antigens of Paragonimus westermani]

Lee OR, Chang JK.

Kisaengchunghak Chapchi. 1986 Dec;24(2):187-193. Korean.

PMID: 12886095 [PubMed - as supplied by publisher]

Related Articles

Dictyostelium discoideum nuclear plasmid Ddp5 is a chimera related to the Ddp1 and Ddp2 plasmid families.

Rieben WK Jr, Gonzales CM, Gonzales ST, Pilkington KJ, Kiyosawa H, Hughes JE, Welker DL.

Genetics. 1998 Mar;148(3):1117-25.

PMID: 9539429 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Tandem duplication, circular permutation, molecular adaptation: how Solanaceae resist pests via inhibitors.

Kong L, Ranganathan S.

BMC Bioinformatics. 2008;9 Suppl 1:S22.

PMID: 18315854 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Compatible Dictyostelium mucoroides nuclear plasmids Dmp1 and Dmp2 both belong to the Ddp1 plasmid family.

Kiyosawa H, Hughes JE, Welker DL.

Plasmid. 1994 Mar;31(2):121-30.

PMID: 8029320 [PubMed - indexed for MEDLINE]

Related Articles

The Ras GTPase-activating-protein-related human protein IQGAP2 harbors a potential actin binding domain and interacts with calmodulin and Rho family GTPases.

Brill S, Li S, Lyman CW, Church DM, Wasmuth JJ, Weissbach L, Bernards A, Snijders AJ.

Mol Cell Biol. 1996 Sep;16(9):4869-78.

PMID: 8756646 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC