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Evolution of vacuolar proton pyrophosphatase domains and volutin granules: clues into the early evolutionary origin of the acidocalcisome

Manfredo J Seufferheld1*, Kyung M Kim2,3, James Whitfield4, Alejandro Valerio5 and Gustavo Caetano-Anollés2

Author Affiliations

1 Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana IL USA

2 Evolutionary Bioinformatics Laboratory, Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana IL USA

3 Korean Bioinformation Center (KOBIC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 305-806, Korea

4 Department of Entomology, University of Illinois at Urbana-Champaign, Urbana IL, USA

5 Department of Evolution, Ecology and Organismal Biology, Museum of Biological Diversity, 1315 Kinnear Rd., Columbus, OH 43210, USA

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Biology Direct 2011, 6:50 doi:10.1186/1745-6150-6-50

Published: 5 October 2011

Additional files

Additional file 1:

Multiple alignments of PF03030 domain sequences distributed in the three superkingdoms (Archaea, Bacteria, and Eukarya). Shown above is the strongly conserved 57-residue region of the V-H+-PPase identified by Hedlund et al [53] and viewed using JALVIEW provided by the Pfam database.

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Open Data

Additional file 2:

Taxa and accession numbers used in the phylogenetic analyses.

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Open Data