Table 1 |
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|
Turmoil-1 elements within the C. elegans genome |
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|
# |
Chr (*) |
Start (**) |
End (**) |
orientation |
Containing RRM domain (***) |
Containing cpg-3 fragment |
Length of the element (****) |
|
|
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|
1 |
I |
216923 |
217647 |
- |
+ (1–827) |
+ |
PL |
|
|
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|
2 |
I |
5979173 |
5980185 |
+ |
+ (1–1177) |
+ |
PL |
|
|
|||||||
|
3 |
I |
5980183 |
5982782 |
- |
+ (1–2771) |
+ |
PL |
|
|
|||||||
|
4 |
I |
7245338 |
7245520 |
+ |
- (125–317) |
+ |
PL |
|
|
|||||||
|
5 |
I |
13973017 |
13973196 |
+ |
- (4691–4882) |
+ |
PL |
|
|
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|
6 |
II |
3351574 |
3356982 |
- |
+ (1–5024) |
+ |
FL |
|
|
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|
7 |
II |
10883165 |
10884063 |
- |
- (519–1090) |
- |
PL |
|
|
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|
8 |
II |
11452621 |
11452867 |
- |
+ (323–568) |
- |
PL |
|
|
|||||||
|
9 |
IV |
2900974 |
2901153 |
+ |
- (125–316) |
+ |
PL |
|
|
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|
(*) chromosome number (**) Start and End according to the coordinates of C. elegans genome version ce6 (May 2008). (***) in brackets the start and end relative to the full sequence of the Turmoil-1 found on chromosome II 3351574 – 3356982 (#6). (****) PL – partial length of Turmoil-1/FL – full length of Turmoil-1. |
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|
Sela et al. Biology Direct 2008 3:41 doi:10.1186/1745-6150-3-41 |
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