 ResearchDetection of co-eluted peptides using database search methodsGelio Alves1 1National Center for Biotechnology Information, National Library of Medicine, NIH, Bethesda, MD, 20894, USA 2Department of Mathematics, University of Maryland, College Park, MD, 20742, USA 3Proteomics Core Facility, National Heart, Lung, and Blood Institute, NIH, Bethesda, MD, 20892, USA
Biology Direct 2008, 3:27doi:10.1186/1745-6150-3-27
Additional filesAdditional file 1: Supporting information for Detection of Co-eluted Peptides using Database Search Methods. ROC curves and cumulative ratio plots of X!Tandem, RAId_DbS and OMSSA from analyzing profile mode spectra generated by LTQ/FT, TOF/TOF and FT/FT instruments. Format: PDF Size: 315KB Download file This file can be viewed with: Adobe Acrobat Reader Additional file 2: Profile co-identifiable-spectra. This file lists the spectra in the co-identifiable set. Each spectrum is listed with the true peptide identified and the standardized E-values by turning the quality scores reported by the five search methods into calibrated E-values [37]. Format: XLS Size: 191KB Download file This file can be viewed with: Microsoft Excel Viewer |
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