|
Time to compute alignments for the full set of human mRNA sequences. The timing is based on a single instance running on Intel Xeon 2.33 GHz/8 GB Linux box. |
||||||
| Sim4 |
Spidey |
BLAT |
GMAP |
SPA |
Splign |
|
|
|
||||||
| CPU hours |
856 |
698 |
8 |
12 |
2448 |
49 |
Kapustin et al. Biology Direct 2008 3:20 doi:10.1186/1745-6150-3-20 |
||||||