|
Co-aligning EST test. 'Implied' is the number of introns estimated from EST-to-mRNA and mRNA-to-genomic alignments. 'Identified' is the number of introns found in EST-to-genomic alignments. 'Matching' is the number of introns in EST-to-genomic alignment matching those found in the mRNA-to-genomic alignments. |
||||||
| Sim4 |
Spidey |
BLAT |
GMAP |
SPA |
Splign |
|
|
|
||||||
| Implied |
3472173 |
3419307 |
3417203 |
3419975 |
3425734 |
3419138 |
| Identified, as %% of Implied |
3174725 |
3249426 |
3150040 |
3219665 |
3407890 |
3352628 |
| 91.4 |
95.0 |
92.2 |
94.1 |
99.5 |
98.1 |
|
| Matching, as %% of Identified |
3128325 |
2813461 |
2810059 |
3202121 |
3294548 |
3314074 |
| 98.5 |
86.6 |
89.2 |
99.5 |
96.7 |
98.9 |
|
Kapustin et al. Biology Direct 2008 3:20 doi:10.1186/1745-6150-3-20 |
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