Table 1

Comparisons of sequence removal via intron (RNA) versus IES (DNA) splicing.

Repeat Pair Sequence
Remainder After Removal as
Length Requirements to be Frame-Preserving




Intron
IES


-X|GTZAGY...
...XGTZAG|Y-
XY
XGTZAGY
Zmod3 = 2
-XA|GTY ...
...XAG|TY-
XATY
XAGTY
Impossible
-XAGZ|GTY ...
... XAG|ZGTY-
XAGZZGTY
XAGZGTY
Zmod3 = 0

X, Y, and Z are arbitrary (potentially zero-length) sequences.

Zrefers to the length in nucleotides of sequence Z and ''mod'' refers to the modulo operator.

Chang et al. Biology Direct 2007 2:6   doi:10.1186/1745-6150-2-6

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