Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea
-
* Corresponding author: Eugene V Koonin koonin@ncbi.nlm.nih.gov
Biology Direct 2007, 2:33 doi:10.1186/1745-6150-2-33
Accesses
- Last 30 days: 134 accesses
- Last year: 1571 accesses
- All time: 8492 accesses
Cited by
BioMed Central: 14 citations
|
Research article
The core and unique proteins of haloarchaea Melinda D Capes, Priya DasSarma, Shiladitya DasSarma BMC Genomics 2012, 13:39 (24 January 2012) |
|
Research
Purine biosynthesis in archaea: variations on a theme Anne M Brown, Samantha L Hoopes, Robert H White, Catherine A Sarisky Biology Direct 2011, 6:63 (14 December 2011) |
|
Research
Kira S Makarova, L Aravind, Yuri I Wolf, Eugene V Koonin Biology Direct 2011, 6:38 (14 July 2011) |
|
Research article
Konstantin V Gunbin, Dmitry A Afonnikov, Nikolay A Kolchanov BMC Genomics 2009, 10:639 (30 December 2009) |
|
Research
Natalya Yutin, Yuri I Wolf, Didier Raoult, Eugene V Koonin Virology Journal 2009, 6:223 (17 December 2009) |
|
Hypothesis
Kira S Makarova, Yuri I Wolf, John van der Oost, Eugene V Koonin Biology Direct 2009, 4:29 (25 August 2009) |
|
Research article
Iain J Anderson, Lakshmi Dharmarajan, Jason Rodriguez, Sean Hooper, Iris Porat, Luke E Ulrich, James G Elkins, Kostas Mavromatis, Hui Sun, Miriam Land, Alla Lapidus, Susan Lucas, Kerrie Barry, Harald Huber, Igor B Zhulin, William B Whitman, Biswarup Mukhopadhyay, Carl Woese, James Bristow, Nikos Kyrpides BMC Genomics 2009, 10:145 (2 April 2009) |
|
Minireview
Happy together: genomic insights into the unique Nanoarchaeum/Ignicoccus association Patrick Forterre, Simonetta Gribaldo, Céline Brochier-Armanet Journal of Biology 2009, 8:7 (23 January 2009) |
|
Discovery notes
Céline Brochier-Armanet, Simonetta Gribaldo, Patrick Forterre Biology Direct 2008, 3:54 (23 December 2008) This article is part of a collection on Origin and early evolution... |
|
Research
Jimmy H Saw, Bruce W Mountain, Lu Feng, Marina V Omelchenko, Shaobin Hou, Jennifer A Saito, Matthew B Stott, Dan Li, Guang Zhao, Junli Wu, Michael Y Galperin, Eugene V Koonin, Kira S Makarova, Yuri I Wolf, Daniel J Rigden, Peter F Dunfield, Lei Wang, Maqsudul Alam Genome Biology 2008, 9:R161 (17 November 2008) Sequencing of the complete genome of Anoxybacillus flavithermus reveals enzymes that are required for silica adaptation and biofilm formation. |
|
Database
Extension of the COG and arCOG databases by amino acid and nucleotide sequences Florian Meereis, Michael Kaufmann BMC Bioinformatics 2008, 9:479 (13 November 2008) |
|
Research
A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans Mircea Podar, Iain Anderson, Kira S Makarova, James G Elkins, Natalia Ivanova, Mark A Wall, Athanasios Lykidis, Kostantinos Mavromatis, Hui Sun, Matthew E Hudson, Wenqiong Chen, Cosmin Deciu, Don Hutchison, Jonathan R Eads, Abraham Anderson, Fillipe Fernandes, Ernest Szeto, Alla Lapidus, Nikos C Kyrpides, Milton H Saier, Paul M Richardson, Reinhard Rachel, Harald Huber, Jonathan A Eisen, Eugene V Koonin, Martin Keller, Karl O Stetter Genome Biology 2008, 9:R158 (10 November 2008) Sequencing of the complete genome of Ignicoccus hospitalis gives insight into its association with another species of Archaea, Nanoarchaeum equitans. |
|
Research
Shaobin Hou, Kira S Makarova, Jimmy HW Saw, Pavel Senin, Benjamin V Ly, Zhemin Zhou, Yan Ren, Jianmei Wang, Michael Y Galperin, Marina V Omelchenko, Yuri I Wolf, Natalya Yutin, Eugene V Koonin, Matthew B Stott, Bruce W Mountain, Michelle A Crowe, Angela V Smirnova, Peter F Dunfield, Lu Feng, Lei Wang, Maqsudul Alam Biology Direct 2008, 3:26 (1 July 2008) Genome sequence of a methanotrophic member of the bacterial phylum Verrucomicrobia reveals adaptations to the methane utilization under acidic conditions and supports grouping Planctomycetes, Verrucomicrobia and Chlamydiae into a superphylum
|
|
Research
Evolutionary primacy of sodium bioenergetics Armen Y Mulkidjanian, Michael Y Galperin, Kira S Makarova, Yuri I Wolf, Eugene V Koonin Biology Direct 2008, 3:13 (1 April 2008) |