Table 1

Nucleotide symbols used: M → (A/C), R → (A/G), W → (A/U), Y → (C/U), S → (C/G), K → (G/U). (Table credit [20])

Protein
High-affinity binding site
Functional ESE

SRp20
WCWWC
GCUCCUCUUCC

CUCKUCY
CCUCGUCC

SC35
AGSAGAGUA
GRYYMCYR

GWUWCCUGCUA
UGCYGYY

GGGUAUGCUG


GAGCAGUAGKS


GUUCGAGUA


UGUUCSAGWU


AGGAGAU


9G8
(GAC)n


ACGAGAGAY


WGGACRA


SF2/ASF
RGAAGAAC
CRSMSGW

AGGACRRAGC


SRp40
UGGGAGCRGUYRGCUCGY
YRCRKM

SRp55

YYWCWSG

TRA2β
(GAA)n


nhRNP Al
UAGGGW


Churbanov et al. Biology Direct 2006 1:10   doi:10.1186/1745-6150-1-10

Open Data